Publications

Anderson, D.M., Keafer, B.A., McGillicuddy, D.J., Mickelson, M.J., Keay, K.E., Libby, P.S., Manning, J.P., Mayo, C.A., Whittaker, D.K., Hickey, J.M., He, R., Lynch, D.R., Smith, K.W., 2005. Initial observations of the 2005 Alexandrium fundyense bloom in southern New England: General patterns and mechanisms. Deep Sea Research II, 52, 2856-2876. (pdf version)

Backer, L.C. and D.J. McGillicuddy, Jr. Harmful Algal Blooms: At the Interface Between Coastal Oceanography and Human Health. Oceanography 19(2) 94-106. (pdf version)

Dana E. Hunt, Vanja Klepac-Ceraj, Silvia G. Acinas, Clement Gautier, Stefan Bertilsson, and Martin F. Polz (2006) Evaluation of 23S rRNA PCR Primers for Use in Phylogenetic Studies of Bacterial Diversity. Appl. Environ. Microbiol. p. 2221–2225 (pdf version)

Erdner, D.L. and D.M. Anderson. 2006. Global transcriptional profiling of the toxic dinoflagellate Alexandrium fundyense using Massively Parallel Signature Sequencing. BMC Genomics 7:88 (1-11).

Luisa A. Marcelino, Vadim Backman, Andres Donaldson, Claudia Steadman, Janelle R. Thompson, Sarah Pacocha Preheim, Cynthia Lien, Eelin Lim, Daniele Veneziano, and Martin F. Polz, Accurately quantifying low-abundant targets amid similar sequences by revealing hidden correlations in oligonucleotide microarray data Proc. Natl. Acad. Sci. Published September 1, 2006, 10.1073/pnas.0601476103

Marcelino, L., Backman, V., Donaldson, A., Steadman, C., Thompson, J.R., Paccocha-Preheim, S., Lien, C., Lim, E., Veneziano, D., Polz, M.F. (2006) Accurate identification of low abundant targets amidst similar sequences by revealing hidden correlations in oligonucleotide microarray data. Proc. Natl. Acad. Sci. USA In Press.

Messerli, S.M. and Greenberg, R.M. (2006) Cnidarian toxins acting on voltage-gated ion channels. Marine Drugs, 4, 70-81.

Mitchell L. Sogin, Hilary G. Morrison, Julie A. Huber, David Mark Welch, Susan M. Huse, Phillip R. Neal, Jesus M. Arrieta, and Gerhard J. Herndl (2006) Microbial diversity in the deep sea and the underexplored "rare biosphere". Proc. Natl. Acad. Sci. vol. 103(32) 12115-12120. [Web site]

Nagai, S., L. McCauley, N. Yasuda, D.L. Erdner, D.M. Kulis, Y. Matsuyama, S. Itakura and D.M. Anderson. 2006. Development of microsatellite markers in the toxic dinoflagellate Alexandrium minutum (Dinophyceae). Molecular Ecology Notes. 6: 756-758.

Polz, M.F., Hunt, D.E., Preheim, S.P., Weinreich, D.M. (2006) Patterns and mechanisms of genetic and phenotypic differentiation in marine microbes. Phil. Trans. R. Soc. Lond. B. In Press.

Pope, W. H., Weigele, P. R., Chang, J., Pedulla, M. L., Ford, M. E., Houtz, J. M., Jiang, W., Chiu, W., Hatfull, G. F., Hendrix, R. W., and King, J. Genome Sequence, Structural Proteins, and Capsid Organization of the Cyanophage Syn5: A “Horned” Bacteriophage of Marine Synechococcus manuscript in preparation

Shanta M. Messerli and Robert M. Greenberg, 2006. Cnidarian Toxins Acting on Voltage-Gated Ion Channels. Marine Drugs, 4, x-x (pdf version)

Sinigalliano, CD, Gidley, ML, Shibata, T, Whitman, D, Dixon, TH, Laws, E, Hou, A, Bachoon, D, Brand, L, Amaral-Zettler, L, Gast, R, Steward, GF, Nigro, OD, Fujioka, R, Betancourt, WQ, Vithanage, G, Mathews, J, Fleming, LE and HM Solo-Gabriele. Microbial measurements in water and sediments of the New Orleans area in the aftermath of hurricanes Katrina and Rita. Proc. Natl. Acad. Sci. Submitted.

Weigele, P. W., Pope, W. H., Pedulla, M. L., Houtz, J. M., Smith, A. L., King, J., Hatfull, G., Lawrence, J. G., and Hendrix, R. W. Genomic sequence and analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus. submitted