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Summer Fellows Publications and Presentations, 2007-2014

Summer Fellow name is in bold.

Aluru, N., K. L. Deak, M. J. Jenny and M. E. Hahn. Developmental exposure to valproic acid alters the expression of microRNAs involved in neurodevelopment in zebrafish. Neurotoxicology and Teratology 2013; 40:46-58.

Aruda AM, Baumgartner MF, Reitzel AM, Tarrant AM. 2011. Heat shock protein expression during stress and diapause in the marine copepod Calanus finmarchicus. Journal of Insect Physiology (special issue on diapause). 57(5):665-75.

Barkan, R., U. ten Brink, and J. Lin, Far field tsunami simulations of the 1755 Lisbon earthquake: Implications for tsunami hazard to the US East Coast and the Caribbean, Marine Geology, 264, 109-122, 2009.

Barkan, R., U. ten Brink, and J. Lin, Trans-Atlantic tsunami: Simulations of the 1755 Lisbon and of hypothetical Puerto Rico trench earthquake tsunami, AGU, Fall Meeting 2008.

Baumgartner, M.F. and S.E. Mussoline. 2011. A generalized baleen whale call detection and classification system.  Journal of the Acoustical Society of America 129:2889-2902.

Brannon, E., Kroeger, K.D., Ganju, N., Pohlman, J. and Green, A. Investigating time variations in DOC concentrations for salt marsh carbon budgets: Testing continuous CDOM measurements as a proxy for DOC.  ASLO 2013 Aquatic Sciences Meeting, New Orleans, Louisiana.

Bors, E.K. and T.M. Shank.  Genetic connectivity of the cold-water coral-dependent deep-sea polychaete Gorgoniapolynoe caeciliae among North Atlantic seamounts, Ocean Sciences Meeting, 2010, Portland, OR.

Breier, J. A., C. R. Rauch, K. McCartney, B. M. Toner, S. Fakra , S. N. White, and C. R. German, A suspended-particle rosette multi-sampler for discrete biogeochemical sampling in low-particle-density waters, Deep Sea. Res. I, 56, 1579-1589, 2009.

Brownlee, E.F., Sosik, H.M., and R.J. Olson. Seasonal variability in ciliates of the New England Shelf, 2010 Ocean Sciences Meeting, Portland, OR, February 2010.

Carozza, J.A., Kido-Soule, M. C.; Kujawinski, E. B.: Quantification of Marine Microbial Metabolites by Mass Spectrometry. ALSO/AGU Ocean Sciences Meeting, Honolulu, HI, 2014

Case, D.H., L.F. Robinson, M.E. Auro and A.C. Gagnon.  Distribution of Mg and Li in Deep-Sea Scleractinian Corals: Implications for "Vital Effects" and Deep-Sea Thermometry.  AGU Fall Meeting, 2009.

Case, D.H., L.F. Robinson, M.E. Auro, Gagnon AC (2010). Environmental and biological controls on Mg and Li in deep-sea scleractinian corals. Earth and Planetary Science Letters. V 300 p 215-225.

Charette, M.A. P.B. Henderson, C.F. Breier, M.E. Gonneea, J. Murray, J.W. Jenson, S. Morales and J. Herrera-Silveira. Submarine Groundwater Discharge of Trace Elements and Isotopes from Karst Systems. 2010 Fall AGU Meeting, San Francisco, CA.     

Charette, M.A, Gonneea, M., Henderson, P., Rao, A., Breier, C., and Murray, J. Subterranean estuaries in karst systems: biogeochemical cycling of trace metals and nutrients. 2009 Geological Society of America Meeting, Portland, Oregon

German, C.R., M.V. Jakuba, J.C. Kinsey, J. Partan, S. Suman, A. Belani, and D.R. Yoerger. A long term vision for long-range ship-free deep ocean operations: persistent presence through coordination of Autonomous Surface Vehicles and Autonomous Underwater Vehicles. 2012 IEEE-AUV Conference. September 2012, Southampton, England.

Ghosh, S., J.P. Canales, S. Carbotte, and M. Nedimovic, 2009, "Upper crustal structure of the Cleft segment of the Juan de Fuca Ridge using 2D streamer travel time tomography", Eos Trans. AGU, 90(52), Fall Meet. Suppl., Abstract S52A-06.

Harbeitner, R, A. Timme-Laragy, and M. Hahn. Altered Responsiveness to Oxidative Stress in Killifish from a Superfund Site, Florida Chapter of the American Fisheries Society, January 2011.

Hernandez, C. M., Paris, C. B.; Kellner, J. B.; Llopiz, J. K. The Influence of Taxon-Specific Vertical Distribution of Coral Reef Fish Larvae on Dispersal and Connectivity. ALSO/AGU Ocean Sciences Meeting, Honolulu, HI, 2014

Hoagland, P., D. Jin, L.Y. Polansky, B. Kirkpatrick, G. Kirkpatrick, L.E. Fleming, A. Reich, S.M. Watkins, S.G. Ullmann and L.C. Backer.  2009.  The costs of respiratory illnesses arising from Florida Gulf Coast Karenia brevis blooms.  Environ. Health Persp. 117:1239-1243.  

Kinsey, J.C. Howland, and Q. Yang. Dynamic Model-Based Nonlinear State Estimation for Underwater Navigation of Remotely Operated Vehicles: Theory and Experiment. IEEE Transactions on Control Systems Technology.

Kujawinski, E. B., Carozza, J.; Johnson, W.; Kido Soule, M. C.; Longnecker, K. Insights into Carbon Cycling along Line P from Integration of Microbial Metabolomics and Dissolved Organic Matter Composition. ALSO/AGU Ocean Sciences Meeting, Honolulu, HI, 2014

List, K., B. Raubenheimer, and S. Elgar, Lidar observations of runup, Abstract OS51B-1319,  presented at 2010 Fall Meeting, AGU, 2010.

Logan, P. D.; Bower, A. S.; Formation and Propagation of Anticyclonic Eddies near the Tail of the Grand Banks. ALSO/AGU Ocean Sciences Meeting, Honolulu, HI, 2014.

Longnecker, K., A. Da Costa, M. Bhatia, and E. B. Kujawinski. 2009. Effect of carbon addition and predation on acetate-assimilating bacterial cells in groundwater. FEMS Microbiology Ecology. 70: 456-470.

Luo, E. Y., Wheeler, J. D.; Helfrich, K.R., Anderson, E. J.; Mullineaux, L. S. Effects of Light and Turbulence on Swimming Behavior of Larval Easter Oyster (Crassostrea virginica).ALSO/AGU Ocean Sciences Meeting, Honolulu, HI, 2014

Mayfield K, B.Peucker-Ehrenbrink, R. Calabro, M. Cole Ekberg and D. Prescott.  The Biogeochemistry of small passive margin rivers along the northern U.S. East Coast.  ASLO, New Orleans, Feb. 2013 (poster).

Millar, J. and R. Schmitt, R.  Parameterizing the mixing due to salt fingers.  Ocean Sciences 2008, Orlando, FL. 

Moberg, E.A. and H.M. Sosik. Automated calculation of cell volume from 2D images of phytoplankton with complex shapes. ASLO Meeting, San Juan, Puerto Rico, 13-18 February 2011.

Moulton, M., B. Raubenheimer, S. Elgar, and E. Ladouceur. Nearshore circulation over a muddy seafloor, AGU Fall Meeting, 2008.

Moulton, M., S. Elgar, B. Raubenheimer. Big holes in the surfzone: Waves, Currents, and Sediment Transport in a Seafloor Perturbation Experiment, Abstract OS51B-1299, presented at 2010 Fall Meeting, AGU.

Murty, S.A., W.N. Bernstein, J.E. Ossolinski, R.S. Davis and K. Hughen.   Multi-century Records of SST and NAO Variability from Sr/Ca in Red Sea Corals.  AGU, Fall Meeting, 2010. 

Mussoline, S., A. Guerreiro da Silva, D. Risch, M.F. Baumgartner, and S. Van Parijs.  2010.  Comparative analysis of the occurrence and seasonal patterns of North Atlantic right whale call types in the Northwest Atlantic.  North Atlantic Right Whale Consortium Meeting.  New Bedford, Massachusetts.  November, 2010.

Nag, S. and J.P. Canales, “Waveform Tomography and its Application to Marine Seismic Refraction Data from the Trans-Atlantic Geotraverse”, American Geophysical Union, Joint Assembly 2008.

Nag, S., S.A. Swift, R.A. Stephen, “Using the IODP Expedition 312 Vertical Seismic Profile to investigate to investigate sub-basement Reflections in multi-channel profiles”, AGU Joint Assembly 2008.

Popendorf, K.J., Tanaka, T., Pujo-Pay, M., Lagaria, A., Couties, C., Conan, P., Oriol, L., Sofen, L.E., Moutin, T., Van Mooy, B.A.S., 2011. Gradients in intact polar diacylglycerolipids across the Mediterranean Sea are related to phosphate availability. Biogeosci. 8, 3733-3745.

Pratt, L. J., K. R. Helfrich and D. Leen. (2008)  On the stability of deep overflows. J. Fluid Mech. 602, 241-266.

Rao, A F, Gonneea, M E, Henderson, P B, Fitzsimmons, J, Morales, S, Herrera-Silveira, J, Charette, M A. Nutrient Biogeochemistry of a Karst Aquifer System and its Influence on the Coastal Ocean in the Northern Yucatán Peninsula, México. 2008 AGU/ASLO Ocean Sciences Meeting, Orlando, Florida.

Rempfert, K R, Sievert, S M, Hansel, C M, Webb, S M, and Thomas, F. Insights into Spatial Sulfur Variation within the Modified Gill-Chamber of the Epibiont-Colonized Hydrothermal Vent Shrimp, Rimicaris exoculata. 2013 Fall Meeting, AGU, San Francisco, CA.

Rozell, E., P. Fox, A. Maffei and S. Beaulieu.  A framework for integrating oceanographic data repositories.  Poster presentation, AGU, Fall Meeting, 2010.

Sanchez, A.; Wang, Z.; Kroeger, K.; Signell, J.; Calibration of a CO2 and pH Sensor. ALSO/AGU Ocean Sciences Meeting, Honolulu, HI, 2014.

Santiago Ramos, D., N. Shimizu, and M. Scambellur. Sulfur isotopic variations during subduction of hydrated lithosphere, V52A-04, Fall Meeting, 2012, AGU.

Schmitt, R. W.; Blair, A.; St Laurent, L.; Schanze, J.; Mean Salt Balance of the North Atlantic Salinity Maximum. ALSO/AGU Ocean Sciences Meeting, Honolulu, HI, 2014.

Smith, M. M.; Raubenheimer, B.; Elgar, S.; Sediment Transport in Katama Bay and Inlet, Martha’s Vineyard, Massachusetts. ALSO/AGU Ocean Sciences Meeting, Honolulu, HI, 2014.

Stegeman, J., A. Kubota, B. Woodin, E. Hawley, Z. Janes, B. Lemaire, and J. Goldstone.  Cytochrome P450 gene transcripts in early development of zebrafish Danio rerio. Society of Toxicology, Annual Meeting, 2013, San Antonio, Texas.

Stegeman, J., A. Kubota, E. Hawley, Z. Janes, J.V. Goldstone and B. Lemaire.  Potential roles of cytochrome P450 in very early development, from oocyte to midblastula transition, in zebrafish (Danio rerio), oral presentation,17th International Symposium on Pollutant Responses in Marine Organisms (PRIMO), 5-9 May, 2013, Faro, Portugal. 

Stephenson Haskins, L. E.; Karnauskas, K.  Sensitivity of ENSO to anthropogenic SST pattern formations.   2011 ASLO Aquatic Sciences, Puerto Rico.

Tan, Y and Lin, J. Simulations of Tsunami Triggered by the 1883 Krakatau Volcanic Eruption: Implications for Tsunami Hazard in the South China Sea. 2013 Fall Meeting, AGU, San Francisco, CA.

Thean, Tara, L. Sayigh, A. Kershenbaum, R. Wells and V. Janik. Signature whistle models in wild bottlenose dolphins. Animal Behavior Society Conference, Boulder, Colorado. July 2013.

Van Mooy, B.A.S., Hmelo, L.R., Sofen, L.E., Campagna, S.R., May, A.L., Dyhrman, S.T., Heithoff, A., Webb, E.A., Momper, L., Mincer, T.J., 2012. Quorum sensing control of phosphorus acquisition in Trichodesmium consortia. ISME J. 6.

Vivancos, S. W., D. W. Oppo, W. B. Curry.  Influence of the AMOC on Tropical Hydrology during the Deglaciation:  Insight from the Demerara Rise PP51A-2102, 2012 Fall Meeting, AGU.

Ware, M.  A. Ashton, P. Hoagland, D. Jin, H. Kite-Powell, J. Lorenzo-Trueba.  Modeling the Economics of Beach Nourishment Decisions (OS31A-1 701) 2012 Fall, AGU meeting (poster).

Waters, C.A., B. Peucker-Ehrenbrink, and P.F. Hofmann.  Platinum Group Element and Re-Os Isotope Systematics of Cryogenian Glacial Terminations.  2009 Fall AGU.

Wheeler, J. D., K. R. Helfrich, E. J. Anderson, B. McGann, P. Staats, A. E. Wargula, K. Wilt, and L. S. Mullineaux (2013), Upward swimming of competent oyster larvae Crassostrea virginica persists in highly turbulent flow as detected by PIV flow subtraction, Marine Ecology Progress Series488, 171-185, doi: 10.3354/meps10382.

Winsor, K. and J.F. McManus.  Benthic Foraminiferal Mg/Ca temperature record of the MIS 12-11 glacial cycle:  Implications for climate variability and sea level.  Ocean Sciences, 2008, Orlando, FL.

Xu, N.L., D.M. Glover, and S.C. Doney, 2010: Modeling the potential effects of seasonal variations in seawater carbonate species on calcification, AGU/ASLO/TOS Ocean Sciences Meeting, 2010.

Zaitsev, E. & Johnson, M.D.  Investigating the role of nitric oxide, oxidative stress, and temperature in Symbiodinium spp. Aquatic Sciences, 2011, San Juan Puerto Rico (poster presentation).

Zanette J, Jenny MJ, Goldstone JV, Woodin BR, Watka LA, Bainy AC, Stegeman JJ. New cytochrome P450 1B1, 1C2 and 1D1 genes in the killifish Fundulus heteroclitus: Basal expression and response of five killifish CYP1s to the AHR agonist PCB126.  Aquatic Toxicol. 2009 Jul 26;93(4):234-43. Epub 2009 May 15.

Zhu, E.Y. and M.J. Coolen.  Is Thawing Permafrost as a Result of Global Warming a Possible Significant Source of Degradable Carbon for Microbiota Residing In Situ and in Arctic Rivers?  AGU Fall Meeting, 2008.

Last updated: November 14, 2014