WHOI Core Lab: SEDCORE 2000 Tutorial

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SC2000 was created to allow you to explore our sea floor samples collection and data related to the sample inventory. This new GIS tool was constructed using ESRI's Internet Map Server Software, and is a Web ready version of their traditional ARC VIEW GIS mapping package. Please understand that this is a work in progress and SC2000 is going to be evolving over time. We will be adding more detailed information about existing stations, on hand core descriptions as they are processed, new descriptive material as it is produced and new station data as expeditions are completed. In addition it's likely that we'll be adding and modifying the tools available for manipulating the map displays and additional fields of information as our work on the system continues. So, if you're returning in the future, please check this Tutorial page for news of significant changes that may effect the content or outcome of your search procedures. Your comments are welcome jbroda@whoi.edu (curator) or rgoldsmith@whoi.edu (creator) and we'll be glad to try to answer any questions you might have about utilizing this powerful new tool. Be sure that if your search results in the need for subsamples of any sort from the collection that we'll be ready to provide them or any additional information that you might require concerning your specific interests. Again, contact the curator jbroda@whoi.edu for elaboration on data or sample requests.

A QUICK TOUR OF SC2000

The SC2K Window

There are 3 main zones in the SC2K window:

  1. The horizontal tool bar across the top of the window. For general information about the tools, go to the Help site. Special capabilities and functions of the tools will be described below.
  2. The vertical array of fields or categories on the left side of the window.
  3. The Map Window.
Manipulating any of the buttons on the toolbar, or varying the 'active' fields will change what you see in the map window.

The map window will initially display a 'geographic' projection of the world. Select the type of station data you wish to search or browse from the list of fields to the left of the map window. It is not necessary, but strongly recommended that you restrict your exploring to one major field at a time. This will expedite your search and of course your results will be field specific.

"FIELDS"

  1. CORES: This data subset includes all the sediment cores in the Woods Hole collection. You may select and sort them by a specific device type as your search session proceeds.
  2. DREDGES & GRABS: This suite includes samples collected by many different types of dredges and grab samplers. These are principally hard rock samples, and samples of coarse seabed lithologies, but may also include stations that contain some fine grained sediments.
  3. SUBMERSIBLES: All samples in the collection recovered by Alvin and other DSRV's.
  4. DREDGE ANALYSIS: In addition to station data about dredges and grabs this field contains digitized descriptive summaries of the major lithologies contained within the dredges and grabs. Most of the descriptive information will appear in abbreviated alpha-numeric code on the listing produced. However, where hypertexted [blue] these codes can be readily translated by clicking for pop-up screens of expanded information. Click on the icon for the SC2000 code/definition tablesHelp
How you select and browse the samples in the device specific fields will depend on your search criteria. If your needs involve a specific region of the world ocean, you can use these Zoom and Pan tools to navigate to the area you require.

    Zoom Out    

[Remember to click on the tool bar icon you're using first. This tool will stay "attached" or active on your mouse pointer until you click the icon again, or select another tool.] The Zoom-in tool works in 2 ways: a quick 2X zoom takes place if you click on a spot on the map, or you can click and drag a box [any corner first] around the stations that are of interest to you. To help you keep you bearings when zooming and panning , note that the arrow of you mouse pointer is constantly annotating Longitude and Latitude in the lower left corner of the big window adjacent to the rotating earth icon. Longitude is listed first [- means West] and then Latitude [- means South]. This function works at all levels of zoom.

Once you have selected a field or category of samples you may search and identify the samples in that portion of the database in a variety of ways.

  1. Click on the hammer to pop up the Query a Layer window.
  2. Select a sample type. This will produce a list of fields which you can use to create your query.
  3. If you have a simple query like "all cores taken from the Atlantis II" you can compose this by choosing cores as your sample type then double clicking SHIP, double clicking = , click Get Values, double click AII from the Values list below then click OK. The results window will pop up [again this may not be instantaneous] and the samples that meet your criteria will be highlighted on the map. As before you can get more elaborate information by clicking on hypertexted values on the 'results' list. Note that the proper SYNTAX for the query formula is:

  4. ([FIELD] LOGICAL CONDITION VALUE)

    where field and value appear exactly as they do in the lists above the query formula window.

    Examples:

    ([Ship] = "AII")

    or

    ([Device] = "GGC")

    The presence and spacing of the round and square brackets is critical for proper formula building.

  5. If you need to compose a more complex query formula, you'll have to type into the box manually. The bug mentioned above creates a slight format glitch if you try to double click entire complex formulas. Composing a compound query is not difficult. Just follow the examples below:

  6. SAMPLE TYPE - CORES

    ([Depth] > 3000) and ([Psed] = "CO")

    This would select all cores with a Primary sediment type of Calc Ooze in water depths greater than 3000 meters.

    ([Device] = "PC") and ([Physio] = 10)

    This formula would find all samples taken with a piston corer located in Abyssal plains around the globe. Note that the values for physiographic province and all other coded fields can be found in the SC2000 code/definition tables which can be reached by clicking: Help
     
     
One final suggestion: when changing fields on the Map, take one step at a time for best results. For instance, if you want to change from cores to dredge analysis, turn off the core plots by clicking the box, let the map refresh, then turn on the dredge data. This will keep the mapserver happy and help insure a better exploration experience for you. Your comments and suggestions are welcome.

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