Deputy Director & Vice President for Research

Overview

Latest News

WHOI scientist Mark Baumgartner highlighted in Science Careers, July 31, 2017: "From computation to the ocean, a scientist finds his fit"

Blog post: Editor-in-Chief of JGR: Oceans explains why the new AGU data policy is important for the rigor and long-term security of scientific research: “Do You Expect Me to Just Give Away My Data?

New article: Wilson G, Bryan J, Cranston K, Kitzes J, Nederbragt L, Teal TK (2017) Good enough practices in scientific computing. PLoS Comput Biol 13(6): e1005510. https://doi.org/10.1371/journal.pcbi.1005510

What is Informatics?

Informatics can be described as the science and technologies that transform data into information and knowledge. Informatics is more than computer science or information technology. It refers to the structures, behavior and interactions of systems that store, process, and communicate information. Examples of domain-specific informatics include: Bioinformatics, Biodiversity informatics, Geoinformatics, and Social informatics. The science and technologies of Ocean informatics are now emerging, with many examples shown here in the Projects tab on this webpage.

Ocean Informatics at WHOI

WHOI's Ocean Informatics initiative has 5 main goals in 2017:
Goal 1: Help WHOI staff and students adopt informatics practices and technologies
Goal 2: Become aware of broader community efforts and external opportunities that may lead to new funding
Goal 3: Strengthen connections to expertise within WHOI and our local science community
Goal 4: Help with data and software life cycle management and publishing
Goal 5: Promote WHOI as a leader in expertise on Ocean Informatics

Phase 2 of Ocean Informatics at WHOI began in 2013 with the "Coping with Your Data Workshop" (see Events page). The Ocean Informatics advisory group currently consists of Stace Beaulieu (coordinator of the group, in Biology Dept.), Danie Kinkade (Biology), Joe Futrelle (AOPE), and Lisa Raymond (Co-Director MBLWHOI Library). Please feel free to contact any member of the group with questions. Also, please contact us if you are interested in joining the advisory group.

Phase 1 was active from 2009-2013, led by a 4-person Ocean Informatics Working Group. This Working Group recommended a strategy and an action plan to build a robust data informatics infrastructure at WHOI. Thanks to a modest budget provided by the WHOI directorate alongside synergistic staff resources provided by the Rensselaer Polytechnic Institute (RPI), the group achieved its initial core mission of initiating and expanding a basic Ocean Informatics infrastructure at WHOI. The group and partners brought in external support, established new collaborations, and produced a suite of software tools along with other accomplishments detailed in a final report (see Phase 1 page).

Last updated: September 21, 2017